Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015946281.1_cds_XP_016488498.1_79125
CDS Infomation

[gene=LOC107808480] [db_xref=GeneID:107808480] [protein=pre-mRNA-processing factor 19-like isoform X3] [protein_id=XP_016488498.1] [location=join(20361..20381,21130..21216,21646..21790,21883..22001,22203..22319,23445..23540,23691..23750,24398..24472,25209..25313,25391..25507,25627..25704,25817..25913,26340..26391,26750..26820,26920..27032)] [gbkey=CDS]
Sequence

ATGTTGGGAATGTTTCAGATAGAGTGGGATGGTCTGATGCTATCCAATTTTGCATTGGAA
CAACAATTACATACTGCAAGGCAAGAGCTGAGTCATGCTCTATATCAGCATGATGCTGCA
TGCCGGGTAATTGCTAGGCTGAAAAAGGAAAGGGACGAGGCAAGAGCATTGCTTGCGCAG
GCTGAAAGACAAGTACCCATGGCAGCAACTACAACTGCACCTAATGGTGCTGCTTTAAGC
AATGGGAAAAGAGCTGCGGAGGAGGAGATGGGTCCTGGTGGTAAGAAAATTCGCCAAGGA
ATATCAGGCGATGTTATTAAAGAGCTTCAAGATTGTAATGCTGCTCTTTCACAACAAAGG
AAAAGGCGACAGATTCCTGCAACATTGGCTCCTGTTGATGCTGTTGAAAGATATACCCAG
CTGAATAGTTATCCTCTTCATAAAACAAACAAACCAGGCATTTTGTCTCTGGATATCCAT
TATCCTAAGGACATCATTGCTACTGGTGGGGTTGATTCAAATGCTGTGGTCTTTGATCGG
CCTTCAGGGCAGATTGTATCGACACTAAGTGGTCACTCAAAGAGGGTTACCAGTGTCAGA
TTTGCTGCTGAGGGTGAACTAGTAGTTACTGGCTCTGCAGATAAGACAGTATGTGTGTGG
CAAAGCTCTGAAAATGGAAATTATGACTGTAGGCATACTTTGAAGGATCACAGTGCTGAG
GTGCAAGCTGTCACAGTCCATGCAACCAATAAGTACTTTGTGACGGCTTCTCTTGATGGC
ACATGGTGTTTTTATGAACTTGCTTCTGGTTTATGCCTTGCTCAGGTAGCAGATGCTTCA
GAATCTGAGGGCTACACATCTGCAGCTTTTCATCCTGATGGTCTGATCCTTGGAGCAGGA
ACTTCGGGGGCTCTGGTCAAGATATGGGATGTAAAAAGCCAGGCAAATGTTGCAAAATTT
GATGGCCATGTTGGAGCAGTAACTGCAATCTCCTTCTCAGAAAATGGTTATTTTTTAGCA
ACTGCAGCTCAAGATGGTGTCAAACTTTGGGATTTACGCAAATTGAGAAACTTCAGAAGC
TTTACTCCTTATGATGAAGATACAGCAACTCAATCAGTGGAATTTGACCACAGTGGAAGT
TATCTTGCATTAGGAGGCTCAGATATAAGAGTTCATCAAGCTGCAAGTGTCAAGTCTGAA
TGGAATCTCATCAAAACTTTCCCTGACTTGTCAGGCACAGGTAAAGCAACATGTCTGAAA
TTCGGACCAGATGCGAAGTACATAGCTGTTGGATCCATGGATCGGAATTTAAGAATATTC
GGGCTGCCTGGGGAGGATCAATCAGAAAGTTAG

Peptide Sequence

PEP ID

XP_016488498.1
PEP Infomation

PREDICTED: pre-mRNA-processing factor 19-like isoform X3 [Nicotiana tabacum]
Sequence

MLGMFQIEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARALLAQ
AERQVPMAATTTAPNGAALSNGKRAAEEEMGPGGKKIRQGISGDVIKELQDCNAALSQQR
KRRQIPATLAPVDAVERYTQLNSYPLHKTNKPGILSLDIHYPKDIIATGGVDSNAVVFDR
PSGQIVSTLSGHSKRVTSVRFAAEGELVVTGSADKTVCVWQSSENGNYDCRHTLKDHSAE
VQAVTVHATNKYFVTASLDGTWCFYELASGLCLAQVADASESEGYTSAAFHPDGLILGAG
TSGALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYFLATAAQDGVKLWDLRKLRNFRS
FTPYDEDTATQSVEFDHSGSYLALGGSDIRVHQAASVKSEWNLIKTFPDLSGTGKATCLK
FGPDAKYIAVGSMDRNLRIFGLPGEDQSES

Transcript Sequence

Gene sequence data has not been registered.